index.Rmd

# ftmsRanalysis
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The `ftmsRanalysis` package was designed to help with various steps of processing FT-MS data, including:

* data formatting and manipulation
* reproducible analysis pipeline
* filtering data based on various properties
* calculating meta information for each peak (e.g. NOSC)
* data visualization and summary
* one sample
* multiple samples
* group comparisons

The `ftmsRanalysis` package was developed at [Pacific Northwest National Laboratory](http://www.pnnl.gov){target="_blank"}. See here for more information: [https://msc-viz.emsl.pnnl.gov](https://msc-viz.emsl.pnnl.gov){target="_blank"}. 

See the [Get started](articles/ftmsRanalysis.html) page for a tutorial.

### Installation

The package may be installed from github using the command:

```{r eval=FALSE}
devtools::install_github("EMSL-Computing/ftmsRanalysis")
```