From 0eec87866b22d0741930987bc795936b916148af Mon Sep 17 00:00:00 2001 From: KazeemHamzat Date: Mon, 19 Aug 2024 14:45:10 +0100 Subject: [PATCH 1/4] Create ConceptMap genomics-patient-bornStatus Create ConceptMap genomics-patient-bornStatus --- ...onceptMap-Genomics-patient-bornstatus.json | 52 +++++++++++++++++++ 1 file changed, 52 insertions(+) create mode 100644 ConceptMap/ConceptMap-Genomics-patient-bornstatus.json diff --git a/ConceptMap/ConceptMap-Genomics-patient-bornstatus.json b/ConceptMap/ConceptMap-Genomics-patient-bornstatus.json new file mode 100644 index 0000000..76e2c22 --- /dev/null +++ b/ConceptMap/ConceptMap-Genomics-patient-bornstatus.json @@ -0,0 +1,52 @@ +{ + "resourceType": "ConceptMap", + "id": "genomics-patient-bornstatus", + "url": "https://fhir.nhs.uk/ConceptMap/genomics-patient-bornstatus", + "version": "0.1.0", + "name": "GenomicsPatientBornStatus", + "title": "Genomics Patient Born Status", + "status": "draft", + "date": "2024-08-19T00:00:00.000Z", + "publisher": "NHS England", + "contact": [ + { + "name": "NHS England", + "telecom": [ + { + "system": "email", + "value": "interoperabilityteam@nhs.net" + } + ] + } + ], + "description": "A ConceptMap used for the translation and recording of concepts from MDS source data(code-options) to equivalent Snomed CT codes, and FHIR spec.", + "purpose": "ConceptMap used for the translation and recording of concept to indicate if the patient is a fetal. This is intended for the element Patient.extension:fetalStatus", + "copyright": "Copyright © 2023+ NHS England Licensed under the Apache License, Version 2.0 (the \\\"License\\\"); you may not use this file except in compliance with the License. You may obtain a copy of the License at http://www.apache.org/licenses/LICENSE-2.0 Unless required by applicable law or agreed to in writing, software distributed under the License is distributed on an \\\"AS IS\\\" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. See the License for the specific language governing permissions and limitations under the License. HL7® FHIR® standard Copyright © 2011+ HL7 The HL7® FHIR® standard is used under the FHIR license. You may obtain a copy of the FHIR license at https://www.hl7.org/fhir/license.html.", + "group": [ + { + "target": "http://snomed.info/sct", + "element": [ + { + "code": "fetal", + "display": "Fetal", + "target": [ + { + "code": "potential-for-live-birth", + "display": "Potential For Live Birth", + "equivalence": "equivalent" + } + ] + }, + { + "code": "unregisteredneonate", + "display": "Unregistered Neonate", + "target": [ + { + "equivalence": "unmatched" + } + ] + } + ] + } + ] +} \ No newline at end of file From a585a11749d1066efbcf02efe53a4d249d07ad36 Mon Sep 17 00:00:00 2001 From: KazeemHamzat Date: Mon, 19 Aug 2024 16:46:05 +0100 Subject: [PATCH 2/4] Update genomics-patient-bornstatus Update genomics-patient-bornstatus --- ConceptMap/ConceptMap-Genomics-patient-bornstatus.json | 3 ++- 1 file changed, 2 insertions(+), 1 deletion(-) diff --git a/ConceptMap/ConceptMap-Genomics-patient-bornstatus.json b/ConceptMap/ConceptMap-Genomics-patient-bornstatus.json index 76e2c22..5bb6e3b 100644 --- a/ConceptMap/ConceptMap-Genomics-patient-bornstatus.json +++ b/ConceptMap/ConceptMap-Genomics-patient-bornstatus.json @@ -22,9 +22,10 @@ "description": "A ConceptMap used for the translation and recording of concepts from MDS source data(code-options) to equivalent Snomed CT codes, and FHIR spec.", "purpose": "ConceptMap used for the translation and recording of concept to indicate if the patient is a fetal. This is intended for the element Patient.extension:fetalStatus", "copyright": "Copyright © 2023+ NHS England Licensed under the Apache License, Version 2.0 (the \\\"License\\\"); you may not use this file except in compliance with the License. You may obtain a copy of the License at http://www.apache.org/licenses/LICENSE-2.0 Unless required by applicable law or agreed to in writing, software distributed under the License is distributed on an \\\"AS IS\\\" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. See the License for the specific language governing permissions and limitations under the License. HL7® FHIR® standard Copyright © 2011+ HL7 The HL7® FHIR® standard is used under the FHIR license. You may obtain a copy of the FHIR license at https://www.hl7.org/fhir/license.html.", + "targetUri": "http://hl7.org/fhir/ValueSet/patient-fetalstatus", "group": [ { - "target": "http://snomed.info/sct", + "target": "http://hl7.org/fhir/patient-bornstatus", "element": [ { "code": "fetal", From e266b38c950cc2bf9e309d423e02f1f35da1cdfa Mon Sep 17 00:00:00 2001 From: KazeemHamzat Date: Wed, 21 Aug 2024 18:50:32 +0100 Subject: [PATCH 3/4] Update ConceptMap-Genomics-patient-bornstatus. Update ConceptMap-Genomics-patient-bornstatus. --- ConceptMap/ConceptMap-Genomics-patient-bornstatus.json | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/ConceptMap/ConceptMap-Genomics-patient-bornstatus.json b/ConceptMap/ConceptMap-Genomics-patient-bornstatus.json index 5bb6e3b..075ff86 100644 --- a/ConceptMap/ConceptMap-Genomics-patient-bornstatus.json +++ b/ConceptMap/ConceptMap-Genomics-patient-bornstatus.json @@ -25,7 +25,7 @@ "targetUri": "http://hl7.org/fhir/ValueSet/patient-fetalstatus", "group": [ { - "target": "http://hl7.org/fhir/patient-bornstatus", + "target": "http://hl7.org/fhir/patient-fetalstatus", "element": [ { "code": "fetal", From 6962d7bbffda27757302efec6e450cab659bc354 Mon Sep 17 00:00:00 2001 From: KazeemHamzat Date: Thu, 22 Aug 2024 13:18:05 +0100 Subject: [PATCH 4/4] Update ConceptMap-Genomics-patient-bornstatus Update ConceptMap-Genomics-patient-bornstatus --- ConceptMap/ConceptMap-Genomics-patient-bornstatus.json | 3 ++- 1 file changed, 2 insertions(+), 1 deletion(-) diff --git a/ConceptMap/ConceptMap-Genomics-patient-bornstatus.json b/ConceptMap/ConceptMap-Genomics-patient-bornstatus.json index 075ff86..3fae6d5 100644 --- a/ConceptMap/ConceptMap-Genomics-patient-bornstatus.json +++ b/ConceptMap/ConceptMap-Genomics-patient-bornstatus.json @@ -43,7 +43,8 @@ "display": "Unregistered Neonate", "target": [ { - "equivalence": "unmatched" + "equivalence": "unmatched", + "comment":"No suitable SNOMDED CT code is found. This should be captured by recording the birthDate on the Patient resource (Patient.birthDate)." } ] }