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Repository for code generated by the Michael J. Fox Foundation's (MJFF) Community of Researchers and its Data Community of Practice (DCOP).

This GitHub organization is maintained by members of MJFF staff and champions within our Data Community of Practice (http://rcop.michaeljfox.org). This page is intended to host code generated by MJFF-funded grantees and members of that community.

What is the DCOP and its aims?

MJFF is seeking to foster an inclusive community of research data users who can more easily work with each other using data that have been generated in the search for a cure, treatments, and interventions for people living with Parkinson’s Disease. This is not a place for sharing the data directly—it’s intended to support conversations about how to access, use, and create persistent documentation about existing datasets.

Who is the community for?

Community participants will not be required to have pre-existing access to data, a specific technical background, or MJFF research funding, nor would participation be restricted to a specific data set or type. A neurologist from New York is as valued as a biostatistician from Beijing or a geneticist from Ghana.

What might DCoP members achieve together?

The DCoP aims to bring together individuals so that through knowledge sharing with one another you can:

  • access data tools and guides in a more streamlined way
  • and troubleshoot challenges
  • discuss and evolve shared principles around data sharing and reuse
  • support your professional advancement
  • be inspired by new research topics
  • expand your collaborative networks

For more information, please contact: researchcommunity@michaeljfox.org.

To join or browse our community forum, please visit: http://rcop.michaeljfox.org

For questions about sharing your code to comply with open science policy governing your grant terms, please contact: openscience@michaeljfox.org

Popular repositories Loading

  1. PIE PIE Public

    Parkinson's Insight Engine (PIE) is a Python-based data preprocessing and analysis pipeline designed for researchers working with the Michael J. Fox Foundation's Parkinson's Progression Markers Ini…

    Python 7 5

  2. open-science-guide open-science-guide Public

    Online book for transparent and reproducible data science projects in Parkinson's disease

    R 4 1

  3. Useful-PPMI-Clinical-Codes Useful-PPMI-Clinical-Codes Public

    Repository that stores useful PPMI Python codes

    Jupyter Notebook 4 2

  4. small-analysis-project-template small-analysis-project-template Public

    R 4 1

  5. Imaging Imaging Public

    Offers tips tools for calculation of widely used imaging outcome measures

    MATLAB 4 1

  6. PIE-clean PIE-clean Public

    Parkinson's Insight Engine (PIE) Clean is a Python-based data cleaning pipeline designed for researchers working with the Michael J. Fox Foundation's Parkinson's Progression Markers Initiative (PPM…

    Jupyter Notebook 3 1

Repositories

Showing 10 of 12 repositories
  • PIE Public

    Parkinson's Insight Engine (PIE) is a Python-based data preprocessing and analysis pipeline designed for researchers working with the Michael J. Fox Foundation's Parkinson's Progression Markers Initiative (PPMI) dataset and other MJFF data.

    MJFF-ResearchCommunity/PIE's past year of commit activity
    Python 7 MIT 5 3 0 Updated Sep 21, 2026
  • PIE-Workbench Public

    A modern GUI for the Parkinson's Insight Engine (PIE) ecosystem — no-code analytics for PPMI data

    MJFF-ResearchCommunity/PIE-Workbench's past year of commit activity
    TypeScript 2 MIT 0 0 0 Updated Sep 15, 2026
  • Useful-PPMI-Clinical-Codes Public

    Repository that stores useful PPMI Python codes

    MJFF-ResearchCommunity/Useful-PPMI-Clinical-Codes's past year of commit activity
    Jupyter Notebook 4 2 0 1 Updated Sep 9, 2026
  • open-science-guide Public

    Online book for transparent and reproducible data science projects in Parkinson's disease

    MJFF-ResearchCommunity/open-science-guide's past year of commit activity
    R 4 1 9 0 Updated Sep 4, 2026
  • MJFF-ResearchCommunity/small-analysis-project-template's past year of commit activity
    R 4 1 0 0 Updated Aug 12, 2026
  • Imaging Public

    Offers tips tools for calculation of widely used imaging outcome measures

    MJFF-ResearchCommunity/Imaging's past year of commit activity
    MATLAB 4 1 0 1 Updated Jun 18, 2026
  • getting-started-PD-data Public

    Guide to Getting Started With Parkinson's Disease Data

    MJFF-ResearchCommunity/getting-started-PD-data's past year of commit activity
    CSS 0 0 2 0 Updated Mar 6, 2026
  • PIE-clean Public

    Parkinson's Insight Engine (PIE) Clean is a Python-based data cleaning pipeline designed for researchers working with the Michael J. Fox Foundation's Parkinson's Progression Markers Initiative (PPMI) dataset and other MJFF data. PIE-clean pairs with PIE for data analysis.

    MJFF-ResearchCommunity/PIE-clean's past year of commit activity
    Jupyter Notebook 3 MIT 1 2 0 Updated Mar 2, 2026
  • .github Public

    Community Overview and Contact Information

    MJFF-ResearchCommunity/.github's past year of commit activity
    1 0 0 0 Updated Feb 23, 2026
  • Fox-Insight-Data-Dictionary-Combiner Public

    Repository for code generated by the Michael J. Fox Foundation's Data Community of Practice. For more information, please contact: researchcommunity@michaeljfox.org.

    MJFF-ResearchCommunity/Fox-Insight-Data-Dictionary-Combiner's past year of commit activity
    Python 1 AGPL-3.0 2 0 0 Updated May 6, 2024

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