Hi there,
Great tool! Thank you for making this tool.
I have a basic question, and hope to get some clarification through this forum. I was going through the example output you have described here:
https://hgmd.readthedocs.io/en/latest/Output.html
In the TSNE plots on that page, you have shown Cd74 and Fcer1g_c. But the rankings shown are way too low, but you still say that they are among the top ranked ones. How is that? What am I missing in my understanding?
Do the ranks shown represent single-gene rankings then? Is this why they are low? So, although the single rankings are low, these are good as pairs. Is this why they are still shown as examples?
Would very much appreciate some explanation so that I can clearly understand what these rankings mean. Both in the context of singletons and pairs.
Thank you!
Hi there,
Great tool! Thank you for making this tool.
I have a basic question, and hope to get some clarification through this forum. I was going through the example output you have described here:
https://hgmd.readthedocs.io/en/latest/Output.html
In the TSNE plots on that page, you have shown Cd74 and Fcer1g_c. But the rankings shown are way too low, but you still say that they are among the top ranked ones. How is that? What am I missing in my understanding?
Do the ranks shown represent single-gene rankings then? Is this why they are low? So, although the single rankings are low, these are good as pairs. Is this why they are still shown as examples?
Would very much appreciate some explanation so that I can clearly understand what these rankings mean. Both in the context of singletons and pairs.
Thank you!