Add Azure BioSystems Cielo 6 qPCR support - #1234
Open
hazlamshamin wants to merge 2 commits into
Open
Conversation
added 2 commits
September 2, 2026 19:50
Preserve arbitrary byte values when recording and replaying serial commands. Latin-1 provides a reversible mapping between bytes and capture JSON strings without changing the capture schema.
Add direct USB serial control for Cielo 6 identity, status, storage, run progress, thermal protocol execution, and verified result download. Decode amplification and melting measurements into PLR plate-data models. Compile thermal protocols from instrument-read templates so optical, lid, and exposure settings remain firmware-defined. Program deletion, mechanical lid operation, and tray movement remain outside the public API.
Member
|
PR 1234, the first qPCR machine in PLR! |
Contributor
Author
first thermocycler ✅ |
This file contains hidden or bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
Sign up for free
to join this conversation on GitHub.
Already have an account?
Sign in to comment
Add this suggestion to a batch that can be applied as a single commit.This suggestion is invalid because no changes were made to the code.Suggestions cannot be applied while the pull request is closed.Suggestions cannot be applied while viewing a subset of changes.Only one suggestion per line can be applied in a batch.Add this suggestion to a batch that can be applied as a single commit.Applying suggestions on deleted lines is not supported.You must change the existing code in this line in order to create a valid suggestion.Outdated suggestions cannot be applied.This suggestion has been applied or marked resolved.Suggestions cannot be applied from pending reviews.Suggestions cannot be applied on multi-line comments.Suggestions cannot be applied while the pull request is queued to merge.Suggestion cannot be applied right now. Please check back later.
Summary
Add a v1 PyLabRobot backend for the Azure BioSystems Cielo 6 that communicates directly with the firmware through the shared serial transport and supports complete qPCR workflows.
.AZEresult transfer.Verification
uv run pytest -q— 2,883 tests and 590 subtests passed.uv run mypy pylabrobot— passed across 760 source files..AZEresult transfer..AZEand CSV exports.