SahakyanLab

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1. ROptimus ROptimus Public

   ROptimus: a parallel general purpose adaptive optimisation engine

   R 4

2. GenomicContactDynamics GenomicContactDynamics Public

   Code for the analyses and simulations involved in the Genomic Contact Dynamics research.

   R 3 1

3. kmeRtone kmeRtone Public

   Multi-purpose and transferrable k-meric enrichment/depletion analysis software.

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4. GenomeAssembler_dev GenomeAssembler_dev Public

   Code to simulate the generation of sequencing reads, to de novo assemble a genome, and to calculate breakage propensity scores.

   R 1

5. DNAkmerQM DNAkmerQM Public

   A database of electronic, topological, and QM-derived features calculated for DNA k-mers.

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6. DNAfrAIlib DNAfrAIlib Public

   DNA fragility associated k-meric features for genomic sequence-driven machine learning.

   R 1