feat: add mutation generator and precision/recall detection metrics (#93) - #158
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Summary
Implements #93 — mutation generator with precision/recall detection metrics.
Changes
tool_semantics.mutations: operators for rename, remove tool, add required param, confusing twin, risk escalation, capability drop--seed 0) covering each operator oncebenchmarks/mutations/*/before|after|expected-finding.jsontool-semantics mutatedocs/mutations.md(research positioning)Test plan
pytest tests/test_mutations.pytool-semantics mutate … --seed 0tool-semantics mutate … --corpus benchmarks/mutationsCloses #93