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1. scTIGER scTIGER Public

   The Single-cell Temporal Inference of Gene Regulatory (scTIGER) Networks method is a computational method designed to predict gene regulatory networks (GRNs) using paired datasets of case versus co…

   Python 3 1

2. DOTNB DOTNB Public

   The DOTNB repository is a collection of code files that implement DOTNB across several programming languages. The DOTNB is the distribution for the Difference Of Two Negative Binomial distributions…

   Perl 1 1

3. DEGage DEGage Public

   DEGage is a novel model-based method for gene differential expression analysis between two groups of scRNA-seq count data. It employs a novel family of discrete distributions for describing the dif…

   R 1 1

4. scHIC_Evaluation scHIC_Evaluation Public

   This is a repository for the code scripts of analyzing the data quality across all available scHi-C protocols.

   Python 1

5. DEGage2 DEGage2 Public

   Forked from SabrinaChunn/DEGage2

   The DEGage2 package works to identify differentially expressed genes (DEGs) on bulk RNA-seq data through utilization of DOTNB

   Python 1

6. GATEkeeper GATEkeeper Public

   GATEkeeper is an effective pipeline to detect and annotate mutations. Based on large number of sequenced COVID-19 genomes, GATkepper pipeline provides a useful tool for deep analysis of virus mutat…

   C