Skip to content

Bump jaxlib from 0.3.15 to 0.3.20 in /docker/openproblems-python-scvi - #604

Merged
scottgigante-immunai merged 3 commits into
mainfrom
dependabot/pip/docker/openproblems-python-scvi/jaxlib-0.3.20
Oct 6, 2022
Merged

Bump jaxlib from 0.3.15 to 0.3.20 in /docker/openproblems-python-scvi#604
scottgigante-immunai merged 3 commits into
mainfrom
dependabot/pip/docker/openproblems-python-scvi/jaxlib-0.3.20

Conversation

@dependabot

@dependabot dependabot Bot commented on behalf of github Sep 30, 2022

Copy link
Copy Markdown
Contributor

Bumps jaxlib from 0.3.15 to 0.3.20.

Release notes

Sourced from jaxlib's releases.

jaxlib release v0.3.20

Notable changes:

  • Fixes support for limiting the visible CUDA devices viajax_cuda_visible_devices in distributed jobs. This functionality is needed for the JAX/SLURM integration on GPU (#12533).
Changelog

Sourced from jaxlib's changelog.

jax 0.3.20 (Sep 28, 2022)

  • Bug fixes:
    • Adds missing .pyi files that were missing from the previous release ({jax-issue}[#12536](https://github.com/google/jax/issues/12536)).
    • Fixes an incompatibility between jax 0.3.19 and the libtpu version it pinned ({jax-issue}[#12550](https://github.com/google/jax/issues/12550)). Requires jaxlib 0.3.20.
    • Fix incorrect pip url in setup.py comment ({jax-issue}[#12528](https://github.com/google/jax/issues/12528)).

jaxlib 0.3.20 (Sep 28, 2022)

  • Bug fixes
    • Fixes support for limiting the visible CUDA devices via jax_cuda_visible_devices in distributed jobs. This functionality is needed for the JAX/SLURM integration on GPU ({jax-issue}[#12533](https://github.com/google/jax/issues/12533)).

jax 0.3.19 (Sep 27, 2022)

  • Fixes required jaxlib version.

jax 0.3.18 (Sep 26, 2022)

  • GitHub commits.
  • Changes
    • Ahead-of-time lowering and compilation functionality (tracked in {jax-issue}[#7733](https://github.com/google/jax/issues/7733)) is stable and public. See the overview and the API docs for {mod}jax.stages.
    • Introduced {class}jax.Array, intended to be used for both isinstance checks and type annotations for array types in JAX. Notice that this included some subtle changes to how isinstance works for {class}jax.numpy.ndarray for jax-internal objects, as {class}jax.numpy.ndarray is now a simple alias of {class}jax.Array.
  • Breaking changes
    • jax._src is no longer imported into the from the public jax namespace. This may break users that were using JAX internals.
    • jax.soft_pmap has been deleted. Please use pjit or xmap instead. jax.soft_pmap is undocumented. If it were documented, a deprecation period would have been provided.

jax 0.3.17 (Aug 31, 2022)

  • GitHub commits.
  • Bugs
    • Fix corner case issue in gradient of lax.pow with an exponent of zero ({jax-issue}12041)
  • Breaking changes
    • {func}jax.checkpoint, also known as {func}jax.remat, no longer supports the concrete option, following the previous version's deprecation; see JEP 11830.
  • Changes
    • Added {func}jax.pure_callback that enables calling back to pure Python functions from compiled functions (e.g. functions decorated with jax.jit or jax.pmap).
  • Deprecations:
    • The deprecated DeviceArray.tile() method has been removed. Use {func}jax.numpy.tile ({jax-issue}[#11944](https://github.com/google/jax/issues/11944)).
    • DeviceArray.to_py() has been deprecated. Use np.asarray(x) instead.

jax 0.3.16

... (truncated)

Commits
  • 0282b4b Merge pull request #12538 from jakevdp:bundle-pyi
  • aafc70d Merge pull request #12556 from hawkinsp:rocm
  • 5fe7a54 Merge pull request #12555 from hawkinsp:release
  • 39eabe8 Merge pull request #12552 from hawkinsp:nccl
  • f7bafb3 Disable multiprocess_gpu_test that fails on ROCm.
  • 8d86436 jax/jaxlib 0.3.20 release candidate.
  • eabb91e Fix test failure in GPU CI if NCCL_DEBUG is enabled.
  • 96abd9a Merge pull request #12540 from sharadmv:cond-lowering-fix
  • 96a85bd Make addressable_shards a property like local_shards
  • 9489068 Merge pull request #12546 from mattjj:issue12542
  • Additional commits viewable in compare view

Dependabot compatibility score

Dependabot will resolve any conflicts with this PR as long as you don't alter it yourself. You can also trigger a rebase manually by commenting @dependabot rebase.


Dependabot commands and options

You can trigger Dependabot actions by commenting on this PR:

  • @dependabot rebase will rebase this PR
  • @dependabot recreate will recreate this PR, overwriting any edits that have been made to it
  • @dependabot merge will merge this PR after your CI passes on it
  • @dependabot squash and merge will squash and merge this PR after your CI passes on it
  • @dependabot cancel merge will cancel a previously requested merge and block automerging
  • @dependabot reopen will reopen this PR if it is closed
  • @dependabot close will close this PR and stop Dependabot recreating it. You can achieve the same result by closing it manually
  • @dependabot ignore this major version will close this PR and stop Dependabot creating any more for this major version (unless you reopen the PR or upgrade to it yourself)
  • @dependabot ignore this minor version will close this PR and stop Dependabot creating any more for this minor version (unless you reopen the PR or upgrade to it yourself)
  • @dependabot ignore this dependency will close this PR and stop Dependabot creating any more for this dependency (unless you reopen the PR or upgrade to it yourself)

@dependabot
dependabot Bot force-pushed the dependabot/pip/docker/openproblems-python-scvi/jaxlib-0.3.20 branch 9 times, most recently from d6c68ab to 0829684 Compare October 4, 2022 19:04
Bumps [jaxlib](https://github.com/google/jax) from 0.3.15 to 0.3.20.
- [Release notes](https://github.com/google/jax/releases)
- [Changelog](https://github.com/google/jax/blob/main/CHANGELOG.md)
- [Commits](jax-ml/jax@jaxlib-v0.3.15...jaxlib-v0.3.20)

---
updated-dependencies:
- dependency-name: jaxlib
  dependency-type: direct:production
  update-type: version-update:semver-patch
...

Signed-off-by: dependabot[bot] <support@github.com>
@dependabot
dependabot Bot force-pushed the dependabot/pip/docker/openproblems-python-scvi/jaxlib-0.3.20 branch from 0829684 to e5c7db0 Compare October 5, 2022 16:30
@codecov

codecov Bot commented Oct 6, 2022

Copy link
Copy Markdown

Codecov Report

Base: 94.64% // Head: 94.64% // No change to project coverage 👍

Coverage data is based on head (82e201e) compared to base (b578c4f).
Patch has no changes to coverable lines.

Additional details and impacted files
@@           Coverage Diff           @@
##             main     #604   +/-   ##
=======================================
  Coverage   94.64%   94.64%           
=======================================
  Files         138      138           
  Lines        3438     3438           
  Branches      176      176           
=======================================
  Hits         3254     3254           
  Misses        123      123           
  Partials       61       61           
Flag Coverage Δ
unittests 94.64% <ø> (ø)

Flags with carried forward coverage won't be shown. Click here to find out more.

Help us with your feedback. Take ten seconds to tell us how you rate us. Have a feature suggestion? Share it here.

☔ View full report at Codecov.
📢 Do you have feedback about the report comment? Let us know in this issue.

@scottgigante-immunai
scottgigante-immunai merged commit edda25b into main Oct 6, 2022
@scottgigante-immunai
scottgigante-immunai deleted the dependabot/pip/docker/openproblems-python-scvi/jaxlib-0.3.20 branch October 6, 2022 18:43
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment

Labels

None yet

Projects

None yet

Development

Successfully merging this pull request may close these issues.

1 participant