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How to cite snaptools?

Status: Open.

#43 In r3fang/SnapTools;

· BIGchixu opened on Jan 28, 2026

extract generated binned count matrix from .snap file

Status: Open.

#42 In r3fang/SnapTools;

· feiler98 opened on Sep 8, 2025

how to generate ArchR input files using snap file?

Status: Open.

#41 In r3fang/SnapTools;

· taolincj opened on Sep 2, 2022

snaptools align-paired-end fail to open bam file

Status: Open.

#39 In r3fang/SnapTools;

· mAGLAVE opened on Mar 21, 2022

Custom genome name

Status: Open.

#38 In r3fang/SnapTools;

· kgj1234 opened on Aug 21, 2021

Error creating a snap file from Cellranger's fragment bed.gz file

Status: Open.

#37 In r3fang/SnapTools;

· pabloswfly opened on Aug 2, 2021

MACS2 error

Status: Open.

#36 In r3fang/SnapTools;

· mijhamilt opened on Mar 8, 2021

tagged release

Status: Open.

#35 In r3fang/SnapTools;

· EricDeveaud opened on Jan 21, 2021

is GRCh38 reference compatible with “snaptools align-paired-end”?

Status: Open.

#34 In r3fang/SnapTools;

· shhxiao19 opened on Nov 15, 2020

Bug in isBedQuerynameSorted()

Status: Open.

#33 In r3fang/SnapTools;

· kridsadakorn opened on Oct 9, 2020

The sdev of smat slot is NAN (DiffusionMaps)

Status: Open.

#32 In r3fang/SnapTools;

· ChangliangWang opened on Oct 8, 2020

Trouble running runKNN()

Status: Open.

#28 In r3fang/SnapTools;

· suminwei2772 opened on Apr 6, 2020