Coordinate- and image-based meta-analysis in Python
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May 29, 2026 - Python
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meta-analysis
Here are 79 public repositories matching this topic...
Claude Code skills for medical research — literature search, reporting guidelines, statistical analysis, publication figures. Built by a physician-researcher, tested on real publications. MIT licensed.
pubmed biostatistics manuscript meta-analysis strobe radiology clinical-research literature-review prisma medical-ai systematic-review medical-research tripod-ai diagnostic-accuracy agent-skills claude-code claude-skills reporting-guidelines irb-protocol physician-researcher
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Jun 25, 2026 - Python
Probing Scientific General Intelligence of LLMs with Scientist-Aligned Workflows
agent benchmark reinforcement-learning ai evaluation code-generation meta-analysis multi-modal reasoning sgi code-gen wet-lab-protocols ai4science llm automated-science vllm idea-generation ai-scientist deep-research test-time-scaling
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Jun 2, 2026 - Python
ENIGMA HALFpipe is a user-friendly software that facilitates reproducible analysis of fMRI data
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Jun 22, 2026 - Python
Literature Scanner: Automated collection & analyses of the scientific literature.
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Jun 10, 2026 - Python
Claude Code-powered end-to-end meta-analysis automation: AI-assisted literature review, screening, extraction, analysis, and manuscript generation for systematic reviews and clinical evidence synthesis
python reproducible-research biostatistics data-extraction clinical-trials meta-analysis clinical-research evidence-based-medicine systematic-review research-automation claude-code manuscript-generation
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Apr 12, 2026 - Python
Retrieve PubMed articles, text-mining annotations, or molecular data from >35 Entrez databases via easy to use Python package - built on top of Entrez E-utilities API.
pubmed pubmed-central entrez meta-analysis gene-annotations literature-mining eutilities literature-search entrez-eutilities
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Nov 2, 2023 - Python
Automated systematic literature review pipeline generating publication-ready manuscripts from Scopus/PubMed/Embase with PRISMA compliance, GRADE evidence synthesis, and DOI validation for clinical research.
python pubmed academic-publishing scopus meta-analysis clinical-research literature-review prisma quarto evidence-based-medicine evidence-synthesis systematic-review research-automation grade-assessment research-manuscript
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Jun 9, 2026 - Python
Generating brain activation maps from free-form text query
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Oct 23, 2023 - Python
Pip-installable Python package to automate handsearching and citation searching for systematic reviews.
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Jul 13, 2024 - Python
Manalyzer: End-to-end Automated Meta-analysis with Multi-agent System
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May 27, 2026 - Python
Ranger helps you see the forest among the trees - Ranger is an effect-size meta analysis library creating beautiful forest plots!
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Jun 12, 2023 - Python
BayesFactorFMRI is a tool developed with R and Python to allow neuroimaging researchers to conduct Bayesian second-level analysis of fMRI data and Bayesian meta-analysis of fMRI images with multiprocessing.
gui neuroscience neuroimaging bayesian fmri bayesian-inference meta-analysis bayesian-statistics fmri-data bayesian-meta-analysis
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Nov 24, 2021 - Python
An open-source agentic harness for scientific literature analysis. Coordinates frontier models to extract data, replicate findings, and perform systematic reviews with full provenance tracking.
ai provenance multi-agent gemini data-extraction research-tool meta-analysis reproducibility scientific-research literature-review evidence-synthesis systematic-review llm anthropic agentic
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Jun 17, 2026 - Python
A meta-analysis of fMRI studies of semantic cognition in children
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Nov 3, 2021 - Python
16s rRNA Sequencing Meta-analysis Reproducibility Tool (using mothur).
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Nov 5, 2025 - Python
Author Bias Computation and Scientometric Plotting
publications meta-analysis scientometrics bias authors systematic-reviews bias-detection informetrics
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Nov 18, 2023 - Python
Automate systematic review and meta-analysis workflows with PRISMA compliance — multi-database search (PubMed, Scopus, Embase, Cochrane), deduplication, screening, and flow diagram generation in Python and R
python automation bioinformatics r data-extraction meta-analysis clinical-research prisma evidence-based-medicine evidence-synthesis scopus-api systematic-review research-automation pubmed-api embase-api cochrane-api screening-workflow
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Mar 28, 2026 - Python
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