We are research group located in Vancouver, Canada at the University of British Columbia. We study both liquid (i.e., ctDNA) and tissue biopsies, using novel bioinformatic techniques to discover and validate new biomarkers and to better understand therapy resistance and cancer evolution. You can learn more about our research on our website.
In the future, here you will be able to find some of our computational pipelines that have been used in publications.
Code and example data related to the manuscript "A prospective multicenter study of plasma ctDNA versus archival tumor tissue to guide FGFR-targeted therapy in metastatic urothelial cancer"
SystemVerilog
Forked from mobidic/update_annovar_db
scripts to automatically update ANNOVAR db
Python
NextFlow pipeline for generating high-quality hybrid-capture probe sequences from a list of target mutations / genomic positions
Python
NextFlow pipeline for generating high-quality hybrid-capture probe sequences from a list of target mutations / genomic positions
scripts to automatically update ANNOVAR db
Code and example data related to the manuscript "A prospective multicenter study of plasma ctDNA versus archival tumor tissue to guide FGFR-targeted therapy in metastatic urothelial cancer"
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